Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc5Q8CG46 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Gm27275-201ENSMUST00000184318 272 ntBASIC21.18■□□□□ 0.98
Smc5Q8CG46 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc5Q8CG46 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Smc5Q8CG46 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Gm10517-202ENSMUST00000192970 758 ntBASIC21.17■□□□□ 0.98
Smc5Q8CG46 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.17■□□□□ 0.98
Smc5Q8CG46 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc5Q8CG46 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Smc5Q8CG46 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc5Q8CG46 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc5Q8CG46 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc5Q8CG46 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.16■□□□□ 0.98
Smc5Q8CG46 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc5Q8CG46 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc5Q8CG46 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc5Q8CG46 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc5Q8CG46 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc5Q8CG46 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.15■□□□□ 0.98
Smc5Q8CG46 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc5Q8CG46 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Gm26917-202ENSMUST00000192833 3329 ntBASIC21.14■□□□□ 0.97
Smc5Q8CG46 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smc5Q8CG46 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.13■□□□□ 0.97
Smc5Q8CG46 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.13■□□□□ 0.97
Smc5Q8CG46 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smc5Q8CG46 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 201.9 ms