Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim52Q8CDV4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim52Q8CDV4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim52Q8CDV4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim52Q8CDV4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim52Q8CDV4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trim52Q8CDV4 Gm7153-201ENSMUST00000117092 455 ntBASIC21.14■□□□□ 0.97
Trim52Q8CDV4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.14■□□□□ 0.97
Trim52Q8CDV4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim52Q8CDV4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Trim52Q8CDV4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim52Q8CDV4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim52Q8CDV4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim52Q8CDV4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.11■□□□□ 0.97
Trim52Q8CDV4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim52Q8CDV4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Gm29707-201ENSMUST00000196325 491 ntBASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim52Q8CDV4 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Gm18421-201ENSMUST00000204122 625 ntBASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim52Q8CDV4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.08■□□□□ 0.97
Trim52Q8CDV4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim52Q8CDV4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim52Q8CDV4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Trim52Q8CDV4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim52Q8CDV4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Trim52Q8CDV4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Trim52Q8CDV4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim52Q8CDV4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim52Q8CDV4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim52Q8CDV4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim52Q8CDV4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim52Q8CDV4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim52Q8CDV4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Trim52Q8CDV4 Gm34391-201ENSMUST00000203706 907 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms