Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccdc38Q8CDN8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc38Q8CDN8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Gm15378-201ENSMUST00000121894 207 ntBASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc38Q8CDN8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc38Q8CDN8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc38Q8CDN8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc38Q8CDN8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc38Q8CDN8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Gm10653-202ENSMUST00000139570 835 ntBASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Gm29257-201ENSMUST00000186115 639 ntBASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms