Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcpip1Q8CDG3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Gm13216-201ENSMUST00000117145 591 ntBASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Gm18666-201ENSMUST00000190039 958 ntBASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcpip1Q8CDG3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcpip1Q8CDG3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vcpip1Q8CDG3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Gm42545-201ENSMUST00000202755 922 ntBASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcpip1Q8CDG3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vcpip1Q8CDG3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms