Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lrif1Q8CDD9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lrif1Q8CDD9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrif1Q8CDD9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrif1Q8CDD9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrif1Q8CDD9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrif1Q8CDD9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lrif1Q8CDD9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms