Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nhlrc3Q8CCH2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc3Q8CCH2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc3Q8CCH2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nhlrc3Q8CCH2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.43□□□□□ -0.1
Nhlrc3Q8CCH2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Gm4968-201ENSMUST00000071458 858 ntBASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nhlrc3Q8CCH2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Gm2559-201ENSMUST00000201323 363 ntBASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nhlrc3Q8CCH2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Gm15375-201ENSMUST00000119510 849 ntBASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Gm6576-201ENSMUST00000169678 883 ntBASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Gm5408-201ENSMUST00000197998 747 ntBASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nhlrc3Q8CCH2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Gm13216-201ENSMUST00000117145 591 ntBASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Dio3-201ENSMUST00000097228 1449 ntBASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nhlrc3Q8CCH2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms