Protein–RNA interactions for Protein: Q8CAU1

A130051J06Rik, RIKEN cDNA A130051J0 gene, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A130051J06RikQ8CAU1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A130051J06RikQ8CAU1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A130051J06RikQ8CAU1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.92□□□□□ -0.34
A130051J06RikQ8CAU1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Gm20760-201ENSMUST00000179197 648 ntBASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
A130051J06RikQ8CAU1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
A130051J06RikQ8CAU1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
A130051J06RikQ8CAU1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
A130051J06RikQ8CAU1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Gm10653-202ENSMUST00000139570 835 ntBASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
A130051J06RikQ8CAU1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
A130051J06RikQ8CAU1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms