Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.03■□□□□ 0.48
Uba3Q8C878 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.03■□□□□ 0.48
Uba3Q8C878 Gm43799-201ENSMUST00000201845 579 ntBASIC18.03■□□□□ 0.48
Uba3Q8C878 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.03■□□□□ 0.48
Uba3Q8C878 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Uba3Q8C878 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.02■□□□□ 0.48
Uba3Q8C878 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.02■□□□□ 0.48
Uba3Q8C878 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.02■□□□□ 0.48
Uba3Q8C878 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.02■□□□□ 0.48
Uba3Q8C878 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Uba3Q8C878 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Uba3Q8C878 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Uba3Q8C878 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Uba3Q8C878 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.01■□□□□ 0.47
Uba3Q8C878 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.01■□□□□ 0.47
Uba3Q8C878 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.01■□□□□ 0.47
Uba3Q8C878 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Uba3Q8C878 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Uba3Q8C878 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Uba3Q8C878 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18■□□□□ 0.47
Uba3Q8C878 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Uba3Q8C878 Gm13559-201ENSMUST00000120476 863 ntBASIC18■□□□□ 0.47
Uba3Q8C878 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18■□□□□ 0.47
Uba3Q8C878 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18■□□□□ 0.47
Uba3Q8C878 AC153881.2-201ENSMUST00000214877 204 ntBASIC18■□□□□ 0.47
Uba3Q8C878 Il3ra-202ENSMUST00000223589 738 ntBASIC18■□□□□ 0.47
Uba3Q8C878 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Uba3Q8C878 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Uba3Q8C878 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18■□□□□ 0.47
Uba3Q8C878 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Uba3Q8C878 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Uba3Q8C878 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uba3Q8C878 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.99■□□□□ 0.47
Uba3Q8C878 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Uba3Q8C878 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.99■□□□□ 0.47
Uba3Q8C878 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uba3Q8C878 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Uba3Q8C878 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uba3Q8C878 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.99■□□□□ 0.47
Uba3Q8C878 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uba3Q8C878 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uba3Q8C878 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Uba3Q8C878 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Uba3Q8C878 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Uba3Q8C878 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.98■□□□□ 0.47
Uba3Q8C878 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Uba3Q8C878 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Uba3Q8C878 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Uba3Q8C878 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Uba3Q8C878 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Uba3Q8C878 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms