Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim9Q8C7M3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trim9Q8C7M3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim9Q8C7M3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim9Q8C7M3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim9Q8C7M3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trim9Q8C7M3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Gm27000-201ENSMUST00000182943 842 ntBASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Trim9Q8C7M3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim9Q8C7M3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms