Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tsen54Q8C2A2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsen54Q8C2A2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsen54Q8C2A2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsen54Q8C2A2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tsen54Q8C2A2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tsen54Q8C2A2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tsen54Q8C2A2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tsen54Q8C2A2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Tsen54Q8C2A2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Nespas-201ENSMUST00000143738 1083 ntBASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Idnk-204ENSMUST00000226010 1898 ntBASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tsen54Q8C2A2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms