Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim4Q8C1Q6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.35□□□□□ -0.11
Smim4Q8C1Q6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Gm13158-201ENSMUST00000122007 736 ntBASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smim4Q8C1Q6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim4Q8C1Q6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim4Q8C1Q6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim4Q8C1Q6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smim4Q8C1Q6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Gm11249-201ENSMUST00000117071 859 ntBASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.32□□□□□ -0.12
Smim4Q8C1Q6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms