Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.71■□□□□ 0.42
Trim35Q8C006 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trim35Q8C006 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.7■□□□□ 0.42
Trim35Q8C006 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Gm7977-201ENSMUST00000193787 748 ntBASIC17.7■□□□□ 0.42
Trim35Q8C006 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 AC134860.5-201ENSMUST00000225071 1249 ntBASIC17.7■□□□□ 0.42
Trim35Q8C006 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 AC136019.1-201ENSMUST00000226503 1412 ntBASIC17.7■□□□□ 0.42
Trim35Q8C006 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim35Q8C006 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim35Q8C006 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim35Q8C006 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.69■□□□□ 0.42
Trim35Q8C006 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trim35Q8C006 Gm2399-201ENSMUST00000104944 225 ntBASIC17.69■□□□□ 0.42
Trim35Q8C006 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim35Q8C006 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim35Q8C006 AC154634.2-201ENSMUST00000225983 1184 ntBASIC17.69■□□□□ 0.42
Trim35Q8C006 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim35Q8C006 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim35Q8C006 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim35Q8C006 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.69■□□□□ 0.42
Trim35Q8C006 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.69■□□□□ 0.42
Trim35Q8C006 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim35Q8C006 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim35Q8C006 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim35Q8C006 Gm44863-201ENSMUST00000207613 1422 ntBASIC17.68■□□□□ 0.42
Trim35Q8C006 Gm45072-201ENSMUST00000208673 929 ntBASIC17.68■□□□□ 0.42
Trim35Q8C006 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.68■□□□□ 0.42
Trim35Q8C006 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim35Q8C006 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim35Q8C006 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim35Q8C006 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim35Q8C006 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm11249-201ENSMUST00000117071 859 ntBASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm14739-201ENSMUST00000120424 802 ntBASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm37293-201ENSMUST00000191658 295 ntBASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim35Q8C006 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim35Q8C006 CT025552.1-201ENSMUST00000224561 521 ntBASIC17.67■□□□□ 0.42
Trim35Q8C006 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Trim35Q8C006 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim35Q8C006 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim35Q8C006 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Trim35Q8C006 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms