Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smad3Q8BUN5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smad3Q8BUN5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Smad3Q8BUN5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Gm5264-201ENSMUST00000190584 848 ntBASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Gm6376-201ENSMUST00000209407 580 ntBASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.13■□□□□ 0.49
Smad3Q8BUN5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Gm43575-201ENSMUST00000196420 516 ntBASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Gm5364-201ENSMUST00000216789 889 ntBASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Smad3Q8BUN5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Gm2756-201ENSMUST00000195851 400 ntBASIC18.11■□□□□ 0.49
Smad3Q8BUN5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smad3Q8BUN5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.1■□□□□ 0.49
Smad3Q8BUN5 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.09■□□□□ 0.49
Smad3Q8BUN5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Gm11779-201ENSMUST00000118541 368 ntBASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Gm12350-201ENSMUST00000121208 462 ntBASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Gm6296-201ENSMUST00000222599 943 ntBASIC18.09■□□□□ 0.49
Smad3Q8BUN5 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smad3Q8BUN5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms