Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scfd1Q8BRF7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scfd1Q8BRF7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.53■□□□□ 0.72
Scfd1Q8BRF7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Gm11336-201ENSMUST00000118168 334 ntBASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scfd1Q8BRF7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scfd1Q8BRF7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scfd1Q8BRF7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scfd1Q8BRF7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scfd1Q8BRF7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
Scfd1Q8BRF7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Scfd1Q8BRF7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scfd1Q8BRF7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scfd1Q8BRF7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms