Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Gm22325-201ENSMUST00000158904 308 ntBASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Gm43017-201ENSMUST00000198296 752 ntBASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.15□□□□□ -0.14
Smco3Q8BQM7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smco3Q8BQM7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Gm43060-201ENSMUST00000200621 289 ntBASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smco3Q8BQM7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Gm12821-201ENSMUST00000120022 600 ntBASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Reep4-203ENSMUST00000226563 1444 ntBASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Smco3Q8BQM7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Gm6139-201ENSMUST00000079261 882 ntBASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms