Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Gm5408-201ENSMUST00000197998 747 ntBASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Gm7290-201ENSMUST00000104990 617 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Gm12918-201ENSMUST00000120234 636 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Gm15710-201ENSMUST00000121821 636 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Gm5075-201ENSMUST00000196916 622 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smndc1Q8BGT7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smndc1Q8BGT7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smndc1Q8BGT7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smndc1Q8BGT7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Smndc1Q8BGT7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smndc1Q8BGT7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smndc1Q8BGT7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms