Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim65Q8BFW4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim65Q8BFW4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Trim65Q8BFW4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim65Q8BFW4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.33■□□□□ 0.53
Trim65Q8BFW4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim65Q8BFW4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Gm17661-201ENSMUST00000170317 270 ntBASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim65Q8BFW4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Gm7638-201ENSMUST00000121348 967 ntBASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim65Q8BFW4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Odf3b-204ENSMUST00000227834 930 ntBASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim65Q8BFW4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Mir5122-201ENSMUST00000175004 89 ntBASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Gm9731-201ENSMUST00000209480 747 ntBASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim65Q8BFW4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim65Q8BFW4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms