Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim50Q810I2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim50Q810I2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim50Q810I2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim50Q810I2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim50Q810I2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim50Q810I2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Mir5122-201ENSMUST00000175004 89 ntBASIC16.67■□□□□ 0.26
Trim50Q810I2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim50Q810I2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim50Q810I2 Timm23-208ENSMUST00000226683 750 ntBASIC16.67■□□□□ 0.26
Trim50Q810I2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim50Q810I2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim50Q810I2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim50Q810I2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim50Q810I2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim50Q810I2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim50Q810I2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim50Q810I2 Gm38027-201ENSMUST00000192315 235 ntBASIC16.66■□□□□ 0.26
Trim50Q810I2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.66■□□□□ 0.26
Trim50Q810I2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim50Q810I2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim50Q810I2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Trim50Q810I2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim50Q810I2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim50Q810I2 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.65■□□□□ 0.26
Trim50Q810I2 Odf3b-204ENSMUST00000227834 930 ntBASIC16.65■□□□□ 0.26
Trim50Q810I2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim50Q810I2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.65■□□□□ 0.26
Trim50Q810I2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim50Q810I2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim50Q810I2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.64■□□□□ 0.26
Trim50Q810I2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.64■□□□□ 0.25
Trim50Q810I2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim50Q810I2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim50Q810I2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms