Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Gm27000-201ENSMUST00000182943 842 ntBASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Gm10060-201ENSMUST00000212002 111 ntBASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc28Q80XJ3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Gm13186-201ENSMUST00000118031 316 ntBASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc28Q80XJ3 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.33□□□□□ -0.11
Ttc28Q80XJ3 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.33□□□□□ -0.11
Ttc28Q80XJ3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Gm27702-201ENSMUST00000184512 56 ntBASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc28Q80XJ3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Gm5264-201ENSMUST00000190584 848 ntBASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Gm1401-201ENSMUST00000122048 772 ntBASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc28Q80XJ3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.31□□□□□ -0.12
Ttc28Q80XJ3 Mir5131-201ENSMUST00000175426 93 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms