Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3tc2Q80VA5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Gm9731-201ENSMUST00000209480 747 ntBASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3tc2Q80VA5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3tc2Q80VA5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3tc2Q80VA5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3tc2Q80VA5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3tc2Q80VA5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3tc2Q80VA5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3tc2Q80VA5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sh3tc2Q80VA5 Gm10418-201ENSMUST00000100943 576 ntBASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Gm10566-201ENSMUST00000086739 996 ntBASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sh3tc2Q80VA5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Gm24589-201ENSMUST00000116692 94 ntBASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Il3ra-202ENSMUST00000223589 738 ntBASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sh3tc2Q80VA5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Gm26039-201ENSMUST00000158152 144 ntBASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Mzt1-203ENSMUST00000227948 952 ntBASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sh3tc2Q80VA5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms