Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nphp3Q7TNH6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp3Q7TNH6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp3Q7TNH6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nphp3Q7TNH6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp3Q7TNH6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nphp3Q7TNH6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.77■□□□□ 0.92
Nphp3Q7TNH6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nphp3Q7TNH6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp3Q7TNH6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.77■□□□□ 0.91
Nphp3Q7TNH6 Gm22697-201ENSMUST00000175194 63 ntBASIC20.77■□□□□ 0.91
Nphp3Q7TNH6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
Nphp3Q7TNH6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp3Q7TNH6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp3Q7TNH6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nphp3Q7TNH6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Gm7213-201ENSMUST00000215977 950 ntBASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp3Q7TNH6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp3Q7TNH6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp3Q7TNH6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Gm23634-201ENSMUST00000175071 91 ntBASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Gm27000-201ENSMUST00000182943 842 ntBASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Gm10566-201ENSMUST00000086739 996 ntBASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp3Q7TNH6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp3Q7TNH6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms