Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.72■□□□□ 0.43
Cspg5Q71M36 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cspg5Q71M36 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cspg5Q71M36 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.71■□□□□ 0.43
Cspg5Q71M36 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Gm17971-201ENSMUST00000190239 806 ntBASIC17.71■□□□□ 0.43
Cspg5Q71M36 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.71■□□□□ 0.43
Cspg5Q71M36 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cspg5Q71M36 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.71■□□□□ 0.43
Cspg5Q71M36 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Gm25016-201ENSMUST00000158399 131 ntBASIC17.7■□□□□ 0.42
Cspg5Q71M36 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cspg5Q71M36 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.69■□□□□ 0.42
Cspg5Q71M36 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cspg5Q71M36 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.69■□□□□ 0.42
Cspg5Q71M36 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Gm7791-201ENSMUST00000219066 539 ntBASIC17.68■□□□□ 0.42
Cspg5Q71M36 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Cspg5Q71M36 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cspg5Q71M36 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Gm27704-201ENSMUST00000185094 107 ntBASIC17.67■□□□□ 0.42
Cspg5Q71M36 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cspg5Q71M36 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms