Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc44a1Q6X893 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Gm10231-201ENSMUST00000181584 441 ntBASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Gm10175-202ENSMUST00000208752 441 ntBASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc44a1Q6X893 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Slc44a1Q6X893 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc44a1Q6X893 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Slc44a1Q6X893 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.83■□□□□ 0.76
Slc44a1Q6X893 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Slc44a1Q6X893 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.83■□□□□ 0.76
Slc44a1Q6X893 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.83■□□□□ 0.76
Slc44a1Q6X893 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc44a1Q6X893 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Slc44a1Q6X893 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc44a1Q6X893 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Mir1668-201ENSMUST00000184114 107 ntBASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Slc44a1Q6X893 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Gm7213-201ENSMUST00000215977 950 ntBASIC19.78■□□□□ 0.76
Slc44a1Q6X893 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc44a1Q6X893 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Actl10-202ENSMUST00000226583 1501 ntBASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.77■□□□□ 0.76
Slc44a1Q6X893 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms