Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Gm5874-201ENSMUST00000096101 508 ntBASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scaf4Q6PFF0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scaf4Q6PFF0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Mir6349-201ENSMUST00000184059 97 ntBASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.89■□□□□ 0.29
Scaf4Q6PFF0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Scaf4Q6PFF0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scaf4Q6PFF0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Gm13148-201ENSMUST00000118892 745 ntBASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Gm15039-201ENSMUST00000118914 875 ntBASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Rab3c-203ENSMUST00000224180 967 ntBASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scaf4Q6PFF0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scaf4Q6PFF0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scaf4Q6PFF0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scaf4Q6PFF0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scaf4Q6PFF0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scaf4Q6PFF0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms