Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Snrnp40Q6PE01 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.03■□□□□ -0
Snrnp40Q6PE01 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Snrnp40Q6PE01 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.03■□□□□ -0
Snrnp40Q6PE01 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.02■□□□□ -0
Snrnp40Q6PE01 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Gm15372-201ENSMUST00000120729 834 ntBASIC15.02■□□□□ -0
Snrnp40Q6PE01 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Gm27000-201ENSMUST00000182943 842 ntBASIC15.02■□□□□ -0
Snrnp40Q6PE01 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Snrnp40Q6PE01 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Snrnp40Q6PE01 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.02□□□□□ -0.01
Snrnp40Q6PE01 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Snrnp40Q6PE01 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Snrnp40Q6PE01 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Snrnp40Q6PE01 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Gm13186-201ENSMUST00000118031 316 ntBASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Snrnp40Q6PE01 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Phf7-203ENSMUST00000226565 1971 ntBASIC15□□□□□ -0.01
Snrnp40Q6PE01 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Snrnp40Q6PE01 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Gm18206-201ENSMUST00000207027 926 ntBASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Snrnp40Q6PE01 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms