Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcc2Q6PDG5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Gm12085-201ENSMUST00000119263 940 ntBASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.95■□□□□ 0.78
Smarcc2Q6PDG5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Smarcc2Q6PDG5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Gm3375-201ENSMUST00000203929 796 ntBASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcc2Q6PDG5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Gm30025-201ENSMUST00000218555 728 ntBASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcc2Q6PDG5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms