Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm13148-201ENSMUST00000118892 745 ntBASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tpm4Q6IRU2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 Mir8112-201ENSMUST00000184382 131 ntBASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpm4Q6IRU2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.14■□□□□ 0.66
Tpm4Q6IRU2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Gm11927-201ENSMUST00000118472 759 ntBASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpm4Q6IRU2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.13■□□□□ 0.65
Tpm4Q6IRU2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Mir2861-201ENSMUST00000175539 82 ntBASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Tpm4Q6IRU2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tpm4Q6IRU2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tpm4Q6IRU2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms