Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Krt42Q6IFX2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Gm38285-201ENSMUST00000192928 922 ntBASIC17.62■□□□□ 0.41
Krt42Q6IFX2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Krt42Q6IFX2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Krt42Q6IFX2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Krt42Q6IFX2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Krt42Q6IFX2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Krt42Q6IFX2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Krt42Q6IFX2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.57■□□□□ 0.4
Krt42Q6IFX2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms