Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Scube3Q66PY1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Scube3Q66PY1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Scube3Q66PY1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Gm18959-201ENSMUST00000208954 655 ntBASIC17.95■□□□□ 0.46
Scube3Q66PY1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scube3Q66PY1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.94■□□□□ 0.46
Scube3Q66PY1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.94■□□□□ 0.46
Scube3Q66PY1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scube3Q66PY1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Gm10231-201ENSMUST00000181584 441 ntBASIC17.93■□□□□ 0.46
Scube3Q66PY1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Gm45058-201ENSMUST00000205810 766 ntBASIC17.93■□□□□ 0.46
Scube3Q66PY1 Gm10175-202ENSMUST00000208752 441 ntBASIC17.93■□□□□ 0.46
Scube3Q66PY1 Gm7370-201ENSMUST00000219471 767 ntBASIC17.93■□□□□ 0.46
Scube3Q66PY1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scube3Q66PY1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Mir5130-201ENSMUST00000175160 84 ntBASIC17.92■□□□□ 0.46
Scube3Q66PY1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scube3Q66PY1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scube3Q66PY1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.92■□□□□ 0.46
Scube3Q66PY1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms