Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctnna3Q65CL1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Gm27741-201ENSMUST00000185060 237 ntBASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctnna3Q65CL1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Gm13401-201ENSMUST00000117074 291 ntBASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Gm3375-201ENSMUST00000203929 796 ntBASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctnna3Q65CL1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ctnna3Q65CL1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ctnna3Q65CL1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms