Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp248Q640N4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp248Q640N4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp248Q640N4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp248Q640N4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.04□□□□□ -0.32
Zfp248Q640N4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp248Q640N4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Zfp248Q640N4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Zfp248Q640N4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Gm27275-201ENSMUST00000184318 272 ntBASIC13.03□□□□□ -0.32
Zfp248Q640N4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Zfp248Q640N4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zfp248Q640N4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zfp248Q640N4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zfp248Q640N4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zfp248Q640N4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zfp248Q640N4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zfp248Q640N4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zfp248Q640N4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zfp248Q640N4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.02□□□□□ -0.33
Zfp248Q640N4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.02□□□□□ -0.33
Zfp248Q640N4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Zfp248Q640N4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Gm12441-201ENSMUST00000121806 588 ntBASIC13.01□□□□□ -0.33
Zfp248Q640N4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Gm18666-201ENSMUST00000190039 958 ntBASIC13.01□□□□□ -0.33
Zfp248Q640N4 Gm18025-201ENSMUST00000221733 862 ntBASIC13.01□□□□□ -0.33
Zfp248Q640N4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.01□□□□□ -0.33
Zfp248Q640N4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms