Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.33□□□□□ -0.12
Commd3Q63829 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Commd3Q63829 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
Commd3Q63829 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.32□□□□□ -0.12
Commd3Q63829 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.32□□□□□ -0.12
Commd3Q63829 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Commd3Q63829 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Commd3Q63829 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Commd3Q63829 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Commd3Q63829 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.32□□□□□ -0.12
Commd3Q63829 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Commd3Q63829 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Commd3Q63829 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Commd3Q63829 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.31□□□□□ -0.12
Commd3Q63829 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.31□□□□□ -0.12
Commd3Q63829 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.31□□□□□ -0.12
Commd3Q63829 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Commd3Q63829 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Commd3Q63829 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Commd3Q63829 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Commd3Q63829 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.3□□□□□ -0.12
Commd3Q63829 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Commd3Q63829 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Commd3Q63829 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.3□□□□□ -0.12
Commd3Q63829 Gm26833-201ENSMUST00000180899 440 ntBASIC14.3□□□□□ -0.12
Commd3Q63829 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Commd3Q63829 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Commd3Q63829 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Commd3Q63829 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Commd3Q63829 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.29□□□□□ -0.12
Commd3Q63829 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Commd3Q63829 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Commd3Q63829 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Commd3Q63829 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Commd3Q63829 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Commd3Q63829 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms