Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SspnQ62147 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SspnQ62147 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SspnQ62147 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SspnQ62147 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.32□□□□□ -0.12
SspnQ62147 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.32□□□□□ -0.12
SspnQ62147 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.32□□□□□ -0.12
SspnQ62147 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SspnQ62147 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Gm27275-201ENSMUST00000184318 272 ntBASIC14.32□□□□□ -0.12
SspnQ62147 Mir8112-201ENSMUST00000184382 131 ntBASIC14.32□□□□□ -0.12
SspnQ62147 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.32□□□□□ -0.12
SspnQ62147 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SspnQ62147 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.32□□□□□ -0.12
SspnQ62147 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.32□□□□□ -0.12
SspnQ62147 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.32□□□□□ -0.12
SspnQ62147 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.32□□□□□ -0.12
SspnQ62147 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SspnQ62147 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SspnQ62147 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.31□□□□□ -0.12
SspnQ62147 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SspnQ62147 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Gm13158-201ENSMUST00000122007 736 ntBASIC14.31□□□□□ -0.12
SspnQ62147 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.31□□□□□ -0.12
SspnQ62147 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SspnQ62147 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SspnQ62147 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SspnQ62147 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.31□□□□□ -0.12
SspnQ62147 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SspnQ62147 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.3□□□□□ -0.12
SspnQ62147 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.3□□□□□ -0.12
SspnQ62147 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SspnQ62147 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SspnQ62147 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SspnQ62147 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SspnQ62147 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SspnQ62147 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SspnQ62147 Gm11643-201ENSMUST00000119578 864 ntBASIC14.29□□□□□ -0.12
SspnQ62147 Gm12441-201ENSMUST00000121806 588 ntBASIC14.29□□□□□ -0.12
SspnQ62147 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.29□□□□□ -0.12
SspnQ62147 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.29□□□□□ -0.12
SspnQ62147 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.29□□□□□ -0.12
SspnQ62147 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SspnQ62147 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SspnQ62147 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SspnQ62147 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms