Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm7230-201ENSMUST00000173026 815 ntBASIC16.07■□□□□ 0.16
VcanQ62059 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Mir6956-201ENSMUST00000183598 62 ntBASIC16.07■□□□□ 0.16
VcanQ62059 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
VcanQ62059 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
VcanQ62059 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.07■□□□□ 0.16
VcanQ62059 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.07■□□□□ 0.16
VcanQ62059 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VcanQ62059 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VcanQ62059 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.06■□□□□ 0.16
VcanQ62059 Gm12260-201ENSMUST00000122447 411 ntBASIC16.06■□□□□ 0.16
VcanQ62059 Gm27867-201ENSMUST00000184778 125 ntBASIC16.06■□□□□ 0.16
VcanQ62059 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.06■□□□□ 0.16
VcanQ62059 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
VcanQ62059 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VcanQ62059 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Gm14701-201ENSMUST00000117156 348 ntBASIC16.05■□□□□ 0.16
VcanQ62059 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.05■□□□□ 0.16
VcanQ62059 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
VcanQ62059 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VcanQ62059 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.05■□□□□ 0.16
VcanQ62059 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 AA543401-201ENSMUST00000164248 1269 ntBASIC16.04■□□□□ 0.16
VcanQ62059 Gm27000-201ENSMUST00000182943 842 ntBASIC16.04■□□□□ 0.16
VcanQ62059 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
VcanQ62059 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.04■□□□□ 0.16
VcanQ62059 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.04■□□□□ 0.16
VcanQ62059 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
VcanQ62059 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VcanQ62059 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VcanQ62059 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Gm15173-201ENSMUST00000122049 433 ntBASIC16.03■□□□□ 0.16
VcanQ62059 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.03■□□□□ 0.16
VcanQ62059 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.03■□□□□ 0.16
VcanQ62059 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.03■□□□□ 0.16
VcanQ62059 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VcanQ62059 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VcanQ62059 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VcanQ62059 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VcanQ62059 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.02■□□□□ 0.16
VcanQ62059 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VcanQ62059 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VcanQ62059 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VcanQ62059 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VcanQ62059 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VcanQ62059 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.01■□□□□ 0.15
VcanQ62059 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.01■□□□□ 0.15
VcanQ62059 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VcanQ62059 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VcanQ62059 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VcanQ62059 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.01■□□□□ 0.15
VcanQ62059 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VcanQ62059 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VcanQ62059 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VcanQ62059 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VcanQ62059 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms