Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ift88Q61371 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.95■□□□□ 0.62
Ift88Q61371 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ift88Q61371 Gm11249-201ENSMUST00000117071 859 ntBASIC18.95■□□□□ 0.62
Ift88Q61371 Gm12896-201ENSMUST00000118430 226 ntBASIC18.95■□□□□ 0.62
Ift88Q61371 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.95■□□□□ 0.62
Ift88Q61371 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.95■□□□□ 0.62
Ift88Q61371 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ift88Q61371 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ift88Q61371 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.94■□□□□ 0.62
Ift88Q61371 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ift88Q61371 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ift88Q61371 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ift88Q61371 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ift88Q61371 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ift88Q61371 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ift88Q61371 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ift88Q61371 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ift88Q61371 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ift88Q61371 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ift88Q61371 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ift88Q61371 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.92■□□□□ 0.62
Ift88Q61371 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.92■□□□□ 0.62
Ift88Q61371 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.92■□□□□ 0.62
Ift88Q61371 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ift88Q61371 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.92■□□□□ 0.62
Ift88Q61371 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ift88Q61371 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ift88Q61371 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ift88Q61371 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.91■□□□□ 0.62
Ift88Q61371 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.91■□□□□ 0.62
Ift88Q61371 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.91■□□□□ 0.62
Ift88Q61371 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.91■□□□□ 0.62
Ift88Q61371 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ift88Q61371 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ift88Q61371 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ift88Q61371 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms