Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six4Q61321 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six4Q61321 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Six4Q61321 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.27■□□□□ 0.36
Six4Q61321 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.27■□□□□ 0.36
Six4Q61321 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six4Q61321 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six4Q61321 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six4Q61321 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Six4Q61321 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Six4Q61321 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Six4Q61321 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Six4Q61321 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Six4Q61321 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Six4Q61321 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.26■□□□□ 0.35
Six4Q61321 Gm7370-201ENSMUST00000219471 767 ntBASIC17.26■□□□□ 0.35
Six4Q61321 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.26■□□□□ 0.35
Six4Q61321 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six4Q61321 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six4Q61321 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six4Q61321 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Six4Q61321 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Six4Q61321 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Six4Q61321 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.25■□□□□ 0.35
Six4Q61321 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Six4Q61321 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six4Q61321 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six4Q61321 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.25■□□□□ 0.35
Six4Q61321 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Six4Q61321 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six4Q61321 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.25■□□□□ 0.35
Six4Q61321 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.24■□□□□ 0.35
Six4Q61321 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Six4Q61321 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six4Q61321 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six4Q61321 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.23■□□□□ 0.35
Six4Q61321 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six4Q61321 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six4Q61321 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Six4Q61321 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six4Q61321 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.23■□□□□ 0.35
Six4Q61321 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six4Q61321 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six4Q61321 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six4Q61321 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.22■□□□□ 0.35
Six4Q61321 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.22■□□□□ 0.35
Six4Q61321 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.22■□□□□ 0.35
Six4Q61321 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Gm18958-201ENSMUST00000174258 762 ntBASIC17.22■□□□□ 0.35
Six4Q61321 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Six4Q61321 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.22■□□□□ 0.35
Six4Q61321 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.22■□□□□ 0.35
Six4Q61321 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.22■□□□□ 0.35
Six4Q61321 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six4Q61321 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Six4Q61321 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Gm6433-201ENSMUST00000118634 875 ntBASIC17.21■□□□□ 0.35
Six4Q61321 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Six4Q61321 Gm2274-201ENSMUST00000184539 609 ntBASIC17.21■□□□□ 0.35
Six4Q61321 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Six4Q61321 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Six4Q61321 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.21■□□□□ 0.35
Six4Q61321 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six4Q61321 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms