Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col11a1Q61245 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col11a1Q61245 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col11a1Q61245 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col11a1Q61245 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col11a1Q61245 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col11a1Q61245 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col11a1Q61245 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col11a1Q61245 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col11a1Q61245 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col11a1Q61245 Gm15467-201ENSMUST00000120582 445 ntBASIC19.17■□□□□ 0.66
Col11a1Q61245 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col11a1Q61245 Gm6736-201ENSMUST00000166583 948 ntBASIC19.17■□□□□ 0.66
Col11a1Q61245 Gm7063-201ENSMUST00000186840 981 ntBASIC19.17■□□□□ 0.66
Col11a1Q61245 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col11a1Q61245 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col11a1Q61245 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col11a1Q61245 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col11a1Q61245 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.17■□□□□ 0.66
Col11a1Q61245 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Col11a1Q61245 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Col11a1Q61245 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col11a1Q61245 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Gm23935-201ENSMUST00000102303 57 ntBASIC19.16■□□□□ 0.66
Col11a1Q61245 Gm24270-201ENSMUST00000102326 57 ntBASIC19.16■□□□□ 0.66
Col11a1Q61245 Gm24245-201ENSMUST00000157318 57 ntBASIC19.16■□□□□ 0.66
Col11a1Q61245 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Gm44430-201ENSMUST00000203376 995 ntBASIC19.16■□□□□ 0.66
Col11a1Q61245 Gm7506-201ENSMUST00000207758 815 ntBASIC19.16■□□□□ 0.66
Col11a1Q61245 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col11a1Q61245 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col11a1Q61245 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Col11a1Q61245 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.16■□□□□ 0.66
Col11a1Q61245 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.16■□□□□ 0.66
Col11a1Q61245 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.16■□□□□ 0.66
Col11a1Q61245 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.16■□□□□ 0.66
Col11a1Q61245 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col11a1Q61245 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col11a1Q61245 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Col11a1Q61245 Gm14494-201ENSMUST00000118786 435 ntBASIC19.15■□□□□ 0.66
Col11a1Q61245 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.15■□□□□ 0.66
Col11a1Q61245 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.15■□□□□ 0.66
Col11a1Q61245 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col11a1Q61245 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Col11a1Q61245 Gm15173-201ENSMUST00000122049 433 ntBASIC19.14■□□□□ 0.65
Col11a1Q61245 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Col11a1Q61245 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Col11a1Q61245 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 Gm14140-201ENSMUST00000119999 995 ntBASIC19.14■□□□□ 0.65
Col11a1Q61245 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col11a1Q61245 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Col11a1Q61245 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.14■□□□□ 0.65
Col11a1Q61245 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.14■□□□□ 0.65
Col11a1Q61245 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col11a1Q61245 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.13■□□□□ 0.65
Col11a1Q61245 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col11a1Q61245 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms