Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ptch1Q61115 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ptch1Q61115 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ptch1Q61115 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ptch1Q61115 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Ptch1Q61115 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Ptch1Q61115 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ptch1Q61115 Auts2-212ENSMUST00000178555 309 ntBASIC24.7■■□□□ 1.55
Ptch1Q61115 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
Ptch1Q61115 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Ptch1Q61115 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ptch1Q61115 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ptch1Q61115 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ptch1Q61115 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ptch1Q61115 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ptch1Q61115 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ptch1Q61115 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 Gm13418-201ENSMUST00000119097 944 ntBASIC24.69■■□□□ 1.54
Ptch1Q61115 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ptch1Q61115 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ptch1Q61115 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC24.69■■□□□ 1.54
Ptch1Q61115 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 AC154222.1-201ENSMUST00000223882 475 ntBASIC24.69■■□□□ 1.54
Ptch1Q61115 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ptch1Q61115 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ptch1Q61115 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ptch1Q61115 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Ptch1Q61115 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Ptch1Q61115 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ptch1Q61115 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ptch1Q61115 Gm35558-201ENSMUST00000222675 2219 ntBASIC24.68■■□□□ 1.54
Ptch1Q61115 Gm15173-201ENSMUST00000122049 433 ntBASIC24.68■■□□□ 1.54
Ptch1Q61115 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ptch1Q61115 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ptch1Q61115 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ptch1Q61115 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ptch1Q61115 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ptch1Q61115 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ptch1Q61115 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Ptch1Q61115 Gm24513-201ENSMUST00000174964 138 ntBASIC24.67■■□□□ 1.54
Ptch1Q61115 Gm10576-201ENSMUST00000191927 825 ntBASIC24.67■■□□□ 1.54
Ptch1Q61115 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC24.67■■□□□ 1.54
Ptch1Q61115 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Ptch1Q61115 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
Ptch1Q61115 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC24.66■■□□□ 1.54
Ptch1Q61115 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ptch1Q61115 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptch1Q61115 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptch1Q61115 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptch1Q61115 Gm14140-201ENSMUST00000119999 995 ntBASIC24.65■■□□□ 1.54
Ptch1Q61115 Gm25911-201ENSMUST00000157621 56 ntBASIC24.65■■□□□ 1.54
Ptch1Q61115 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC24.65■■□□□ 1.54
Ptch1Q61115 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC24.65■■□□□ 1.54
Ptch1Q61115 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC24.65■■□□□ 1.54
Ptch1Q61115 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptch1Q61115 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptch1Q61115 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptch1Q61115 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ptch1Q61115 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC24.64■■□□□ 1.54
Ptch1Q61115 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC24.64■■□□□ 1.54
Ptch1Q61115 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ptch1Q61115 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC24.64■■□□□ 1.54
Ptch1Q61115 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC24.64■■□□□ 1.54
Ptch1Q61115 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Ptch1Q61115 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC24.64■■□□□ 1.54
Ptch1Q61115 Gm27397-201ENSMUST00000184997 107 ntBASIC24.64■■□□□ 1.54
Ptch1Q61115 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC24.64■■□□□ 1.54
Ptch1Q61115 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ptch1Q61115 Gm15590-201ENSMUST00000078419 552 ntBASIC24.64■■□□□ 1.54
Ptch1Q61115 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Ptch1Q61115 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ptch1Q61115 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ptch1Q61115 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
Ptch1Q61115 Gm4535-201ENSMUST00000182274 558 ntBASIC24.63■■□□□ 1.53
Ptch1Q61115 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ptch1Q61115 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC24.63■■□□□ 1.53
Ptch1Q61115 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Ptch1Q61115 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Gm10355-201ENSMUST00000097146 517 ntBASIC24.63■■□□□ 1.53
Ptch1Q61115 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ptch1Q61115 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms