Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col12a1Q60847 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col12a1Q60847 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col12a1Q60847 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col12a1Q60847 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col12a1Q60847 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col12a1Q60847 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col12a1Q60847 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col12a1Q60847 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col12a1Q60847 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col12a1Q60847 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col12a1Q60847 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.92■□□□□ 0.3
Col12a1Q60847 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col12a1Q60847 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.92■□□□□ 0.3
Col12a1Q60847 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col12a1Q60847 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col12a1Q60847 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.91■□□□□ 0.3
Col12a1Q60847 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.91■□□□□ 0.3
Col12a1Q60847 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col12a1Q60847 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col12a1Q60847 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Col12a1Q60847 Idnk-204ENSMUST00000226010 1898 ntBASIC16.91■□□□□ 0.3
Col12a1Q60847 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col12a1Q60847 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.9■□□□□ 0.3
Col12a1Q60847 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.9■□□□□ 0.3
Col12a1Q60847 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.9■□□□□ 0.3
Col12a1Q60847 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col12a1Q60847 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.9■□□□□ 0.3
Col12a1Q60847 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.9■□□□□ 0.3
Col12a1Q60847 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col12a1Q60847 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col12a1Q60847 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.89■□□□□ 0.29
Col12a1Q60847 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Col12a1Q60847 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.89■□□□□ 0.29
Col12a1Q60847 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.89■□□□□ 0.29
Col12a1Q60847 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.89■□□□□ 0.29
Col12a1Q60847 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Col12a1Q60847 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col12a1Q60847 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col12a1Q60847 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col12a1Q60847 Gm15165-201ENSMUST00000118140 502 ntBASIC16.88■□□□□ 0.29
Col12a1Q60847 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.88■□□□□ 0.29
Col12a1Q60847 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col12a1Q60847 Gm25990-201ENSMUST00000102440 86 ntBASIC16.87■□□□□ 0.29
Col12a1Q60847 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col12a1Q60847 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.87■□□□□ 0.29
Col12a1Q60847 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.87■□□□□ 0.29
Col12a1Q60847 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.87■□□□□ 0.29
Col12a1Q60847 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col12a1Q60847 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.87■□□□□ 0.29
Col12a1Q60847 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.87■□□□□ 0.29
Col12a1Q60847 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.87■□□□□ 0.29
Col12a1Q60847 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col12a1Q60847 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms