Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tcf4Q60722 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.8■□□□□ 0.44
Tcf4Q60722 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tcf4Q60722 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tcf4Q60722 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.79■□□□□ 0.44
Tcf4Q60722 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.79■□□□□ 0.44
Tcf4Q60722 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.79■□□□□ 0.44
Tcf4Q60722 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tcf4Q60722 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.79■□□□□ 0.44
Tcf4Q60722 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tcf4Q60722 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Tcf4Q60722 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Tcf4Q60722 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tcf4Q60722 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.78■□□□□ 0.44
Tcf4Q60722 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.78■□□□□ 0.44
Tcf4Q60722 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcf4Q60722 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.78■□□□□ 0.44
Tcf4Q60722 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcf4Q60722 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcf4Q60722 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcf4Q60722 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tcf4Q60722 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcf4Q60722 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcf4Q60722 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.77■□□□□ 0.44
Tcf4Q60722 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcf4Q60722 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.77■□□□□ 0.44
Tcf4Q60722 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.77■□□□□ 0.44
Tcf4Q60722 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tcf4Q60722 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tcf4Q60722 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Tcf4Q60722 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tcf4Q60722 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tcf4Q60722 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tcf4Q60722 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tcf4Q60722 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tcf4Q60722 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Gm715-201ENSMUST00000117865 831 ntBASIC17.76■□□□□ 0.43
Tcf4Q60722 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.76■□□□□ 0.43
Tcf4Q60722 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Tcf4Q60722 Gm22240-201ENSMUST00000175225 82 ntBASIC17.76■□□□□ 0.43
Tcf4Q60722 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tcf4Q60722 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.76■□□□□ 0.43
Tcf4Q60722 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tcf4Q60722 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.76■□□□□ 0.43
Tcf4Q60722 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.76■□□□□ 0.43
Tcf4Q60722 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tcf4Q60722 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcf4Q60722 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tcf4Q60722 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcf4Q60722 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tcf4Q60722 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcf4Q60722 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tcf4Q60722 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.75■□□□□ 0.43
Tcf4Q60722 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tcf4Q60722 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms