Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Satb1Q60611 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Satb1Q60611 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Satb1Q60611 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Satb1Q60611 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Satb1Q60611 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Satb1Q60611 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Satb1Q60611 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Satb1Q60611 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Satb1Q60611 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Satb1Q60611 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.66■□□□□ 0.42
Satb1Q60611 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.66■□□□□ 0.42
Satb1Q60611 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Satb1Q60611 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Satb1Q60611 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.65■□□□□ 0.42
Satb1Q60611 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Satb1Q60611 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Gm11950-201ENSMUST00000121615 838 ntBASIC17.65■□□□□ 0.42
Satb1Q60611 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Mir8098-201ENSMUST00000184011 137 ntBASIC17.65■□□□□ 0.42
Satb1Q60611 Mir1668-201ENSMUST00000184114 107 ntBASIC17.65■□□□□ 0.42
Satb1Q60611 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Satb1Q60611 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Satb1Q60611 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Satb1Q60611 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Satb1Q60611 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Satb1Q60611 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Satb1Q60611 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Satb1Q60611 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Satb1Q60611 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.64■□□□□ 0.41
Satb1Q60611 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.64■□□□□ 0.41
Satb1Q60611 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Satb1Q60611 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.63■□□□□ 0.41
Satb1Q60611 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Satb1Q60611 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Satb1Q60611 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.63■□□□□ 0.41
Satb1Q60611 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Birc2-201ENSMUST00000054878 378 ntBASIC17.63■□□□□ 0.41
Satb1Q60611 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.63■□□□□ 0.41
Satb1Q60611 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Satb1Q60611 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.63■□□□□ 0.41
Satb1Q60611 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Satb1Q60611 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms