Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.78■□□□□ 0.92
Ubr3Q5U430 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubr3Q5U430 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.78■□□□□ 0.92
Ubr3Q5U430 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.77■□□□□ 0.92
Ubr3Q5U430 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.77■□□□□ 0.92
Ubr3Q5U430 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.77■□□□□ 0.92
Ubr3Q5U430 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Ubr3Q5U430 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubr3Q5U430 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.77■□□□□ 0.92
Ubr3Q5U430 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.77■□□□□ 0.92
Ubr3Q5U430 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubr3Q5U430 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubr3Q5U430 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ubr3Q5U430 Gm13036-201ENSMUST00000117799 748 ntBASIC20.77■□□□□ 0.92
Ubr3Q5U430 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Ubr3Q5U430 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ubr3Q5U430 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ubr3Q5U430 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ubr3Q5U430 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubr3Q5U430 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubr3Q5U430 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubr3Q5U430 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.76■□□□□ 0.91
Ubr3Q5U430 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubr3Q5U430 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ubr3Q5U430 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubr3Q5U430 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ubr3Q5U430 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm23935-201ENSMUST00000102303 57 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm24270-201ENSMUST00000102326 57 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm15467-201ENSMUST00000120582 445 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm24245-201ENSMUST00000157318 57 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm7506-201ENSMUST00000207758 815 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm12260-201ENSMUST00000122447 411 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm2213-201ENSMUST00000197485 688 ntBASIC20.75■□□□□ 0.91
Ubr3Q5U430 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ubr3Q5U430 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Gm14494-201ENSMUST00000118786 435 ntBASIC20.74■□□□□ 0.91
Ubr3Q5U430 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubr3Q5U430 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.73■□□□□ 0.91
Ubr3Q5U430 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Gm14140-201ENSMUST00000119999 995 ntBASIC20.73■□□□□ 0.91
Ubr3Q5U430 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.73■□□□□ 0.91
Ubr3Q5U430 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubr3Q5U430 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubr3Q5U430 Gm15173-201ENSMUST00000122049 433 ntBASIC20.72■□□□□ 0.91
Ubr3Q5U430 Gm25911-201ENSMUST00000157621 56 ntBASIC20.72■□□□□ 0.91
Ubr3Q5U430 Gm25745-201ENSMUST00000174945 133 ntBASIC20.72■□□□□ 0.91
Ubr3Q5U430 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms