Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shroom1Q5SX79 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shroom1Q5SX79 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Gm9013-201ENSMUST00000132939 882 ntBASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Gm5587-201ENSMUST00000206270 674 ntBASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shroom1Q5SX79 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Gm14859-201ENSMUST00000117752 357 ntBASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Idnk-204ENSMUST00000226010 1898 ntBASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Shroom1Q5SX79 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Shroom1Q5SX79 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shroom1Q5SX79 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shroom1Q5SX79 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Shroom1Q5SX79 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Shroom1Q5SX79 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms