Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.54■□□□□ 0.88
Vps54Q5SPW0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps54Q5SPW0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps54Q5SPW0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps54Q5SPW0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Gm13474-201ENSMUST00000122466 815 ntBASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Gm7213-201ENSMUST00000215977 950 ntBASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps54Q5SPW0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.52■□□□□ 0.88
Vps54Q5SPW0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps54Q5SPW0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Vps54Q5SPW0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vps54Q5SPW0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps54Q5SPW0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Gm22697-201ENSMUST00000175194 63 ntBASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps54Q5SPW0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.49■□□□□ 0.87
Vps54Q5SPW0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps54Q5SPW0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms