Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav6-3Q5R1E6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Gm12382-201ENSMUST00000122005 922 ntBASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-3Q5R1E6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Gm18666-201ENSMUST00000190039 958 ntBASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Gm37292-201ENSMUST00000192062 758 ntBASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-3Q5R1E6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Gm27275-201ENSMUST00000184318 272 ntBASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-3Q5R1E6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms