Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf43Q5NCP0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Gm34391-201ENSMUST00000203706 907 ntBASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf43Q5NCP0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Olfr129-201ENSMUST00000122318 993 ntBASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf43Q5NCP0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Mir8112-201ENSMUST00000184382 131 ntBASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf43Q5NCP0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Birc2-201ENSMUST00000054878 378 ntBASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf43Q5NCP0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf43Q5NCP0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms