Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Gm12085-201ENSMUST00000119263 940 ntBASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Gm10812-201ENSMUST00000099864 546 ntBASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf20Q5DTM8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Timm23-208ENSMUST00000226683 750 ntBASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf20Q5DTM8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Gm38027-201ENSMUST00000192315 235 ntBASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf20Q5DTM8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf20Q5DTM8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf20Q5DTM8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf20Q5DTM8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf20Q5DTM8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf20Q5DTM8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Gm715-201ENSMUST00000117865 831 ntBASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Gm9731-201ENSMUST00000209480 747 ntBASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf20Q5DTM8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf20Q5DTM8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.3■□□□□ 0.84
Rnf20Q5DTM8 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms