Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syne3Q4FZC9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Syne3Q4FZC9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syne3Q4FZC9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Syne3Q4FZC9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.18■□□□□ 0.5
Syne3Q4FZC9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syne3Q4FZC9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syne3Q4FZC9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Mir8112-201ENSMUST00000184382 131 ntBASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.17■□□□□ 0.5
Syne3Q4FZC9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syne3Q4FZC9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syne3Q4FZC9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Gm13401-201ENSMUST00000117074 291 ntBASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syne3Q4FZC9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Syne3Q4FZC9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.14■□□□□ 0.5
Syne3Q4FZC9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Gm10517-202ENSMUST00000192970 758 ntBASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syne3Q4FZC9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Gm4974-201ENSMUST00000209974 875 ntBASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Syne3Q4FZC9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms