Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ckap2Q3V1H1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap2Q3V1H1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Gm18958-201ENSMUST00000174258 762 ntBASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Gm2274-201ENSMUST00000184539 609 ntBASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap2Q3V1H1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Gm16061-201ENSMUST00000122167 857 ntBASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap2Q3V1H1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ckap2Q3V1H1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ckap2Q3V1H1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ckap2Q3V1H1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ckap2Q3V1H1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.58■□□□□ 0.73
Ckap2Q3V1H1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ckap2Q3V1H1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Gm7889-201ENSMUST00000185591 958 ntBASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap2Q3V1H1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.56■□□□□ 0.72
Ckap2Q3V1H1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms