Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Gm21362-201ENSMUST00000194272 928 ntBASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Gm11355-201ENSMUST00000121120 306 ntBASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Gm25016-201ENSMUST00000158399 131 ntBASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf223Q3UV31 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf223Q3UV31 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Gm33142-201ENSMUST00000193913 867 ntBASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Gm5587-201ENSMUST00000206270 674 ntBASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf223Q3UV31 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Gm9013-201ENSMUST00000132939 882 ntBASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Gm7367-201ENSMUST00000057611 492 ntBASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf223Q3UV31 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Rnf223Q3UV31 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf223Q3UV31 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms